Protein Information

Protein ZmHB41
ZmHB41 is a protein in the Homeobox family.
Information
TF Name:	ZmHB41
Species:	Maize
TF Family:	Homeobox
Gene Name(Synonym):	HB41
Uniprot ID:	B6U539

Overview of domains present in v5 transcripts
	PF00046	PF02183
Zm00001eb248930_T001

Gene ID	Type	Sequence	FIMO	Position
Zm00001d017422	DAPseq	sequence	fimo	position
Zm00001d017422	DAPseq	sequence	fimo	position
Zm00001d017422	ChIPseq	sequence	fimo	position
Zm00001d017422	PChIPseq	sequence	fimo	position

Zm00001eb248930_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

MERGDCQFTVVPPRQYDEAQFMHQLMVAGDQQDPAGAGRGAAAAGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELA
RELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRAQFDAMHARVESLRQEKIALAAQVDELRGRLNERQDQSGSCEVNDA
EAAADDKRNNSTSSLVQDDGATPPPAAVDASEDSAATGEYYDHVAYEYDGLHDPFVCATPDLWDTWPLLEWNAVA

Secondary Structure Color Code
BEND	region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P	left-handed polyproline helix
HELX_RH_3T_P	right-handed 3-10 helix
HELX_RH_AL_P	right-handed alpha helix
HELX_RH_PI_P	right-handed pi helix
STRN	beta strand
TURN_TY1_P	type I turn
UNDETERMINED	no data available

Domains Present
PF00046
PF02183
PF00046
PF02183
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Nucleotide Sequence
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CCAGCCACTCCACTTGCTACTACTA...

GRMZM2G117164_T01 from maize genome v3

Related TFome: pUT6833

Amino Acid Sequence
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MERGDCQFTVVPPRQYDEAQFMHQLMVAGDQQDPAGAGRGAAAAGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELA
RELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRAQFDAMHARVESLRQEKIALAAQVDELRGRLNERQDQSGSCEVNDA
EAAADDKRNNSTSSLVQDDGATPPPAAVDASEDSAATGEYYDHVAYEYDGLHDPFVCATPDLWDTWPLLEWNAVA

Nucleotide Sequence
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CCAGCCACTCCACTTGCTACTACTA...

Zm00001d017422_T001 from maize genome v4

Amino Acid Sequence
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MERGDCQFTVVPPRQYDEAQFMHQLMVAGDQQDPAGAGRGAAAAGGERKRRFTEEQVRSLETTFHARRAKLEPREKAELA
RELGLQPRQVAIWFQNKRARWRSKQLEHDYAALRAQFDAMHARVESLRQEKIALAAQVDELRGRLNERQDQSGSCEVNDA
EAAADDKRNNSTSSLVQDDGATPPPAAVDASEDSAATGEYYDHVAYEYDGLHDPFVCATPDLWDTWPLLEWNAVA

Nucleotide Sequence
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ACTTGCTACTACTACACACAAACAC...

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Protein ZmHB41

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs

Interactions where ZmHB41 is the regulator

Interactions where ZmHB41 is the target
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Zm00001eb248930_T001 from maize genome v5

Amino Acid Sequence
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Color Coding: None Secondary Structure Domain

Nucleotide Sequence
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GRMZM2G117164_T01 from maize genome v3

Amino Acid Sequence
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Nucleotide Sequence
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Zm00001d017422_T001 from maize genome v4

Amino Acid Sequence
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Nucleotide Sequence
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